Well, you should be sure first if it's connected. Since, it was perhaps a storage disk (with no OS on it) from the beginning, nothing could happen if you disconnected it.
Just open your case and check if you see something HDD-like there... If you're not sure how a HDD should look like, just check google images for a picture - you perhaps should observe the back side of it, where the power and SATA connector is located


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